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Bioinformatics Programmer/Analyst II Salary in the United States

How much does a Bioinformatics Programmer/Analyst II make in the United States?

As of March 01, 2026, the average salary for a Bioinformatics Programmer/Analyst II in the United States is $98,000 per year, which breaks down to an hourly rate of $47.

However, a Bioinformatics Programmer/Analyst II's salary can vary significantly. Here’s a look at the typical salary range:

  • Top Earners (90th percentile): $113,475
  • Majority Range (25th-75th percentile): $88,800 to $106,100
  • Entry-Level (10th percentile): $80,424
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View as table View as graph 25% $88,800 10% $80,424 90% $113,475 75% $106,100 $98,000 50%(Median) Didn’t find job title? Click

Bioinformatics Programmer/Analyst II Salaries by Percentile

Annual
Salary
Monthly
Pay
Weekly
Pay
Hourly
Wage
75th Percentile $106,100 $8,842 $2,040 $51
Average $98,000 $8,167 $1,885 $47
25th Percentile $88,800 $7,400 $1,708 $43
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Key Factors That Influence Bioinformatics Programmer/Analyst II Salaries

A Bioinformatics Programmer/Analyst II's salary isn't a fixed number. It's shaped by several important factors. Below, we'll explore how your years of experience, geographic location, education and company size can directly affect your earning potential.

How Experience Level Affects Bioinformatics Programmer/Analyst Salaries?

Experience is a primary driver of a Bioinformatics Programmer/Analyst II's salary. As you build your skills and take on more complex tasks, your compensation generally increases. Here's how the average salary grows at different career stages:

  • Bioinformatics Programmer/Analyst I (0-2 years): $72,158
  • Bioinformatics Programmer/Analyst II (2-4 years): $97,916
  • Bioinformatics Programmer/Analyst III (4-7 years): $107,670
  • Bioinformatics Programmer/Analyst IV (7+ years): $134,720
Job Role Years of Experience Average Salary
Bioinformatics Programmer/Analyst I0-2 years$72,158
Bioinformatics Programmer/Analyst II2-4 years$97,916
Bioinformatics Programmer/Analyst III4-7 years$107,670
Bioinformatics Programmer/Analyst IV7+ years$134,720
$72,158 Bioinform...
$97,916 Bioinform...
$107,670 Bioinform...
$134,720 Bioinform...
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What Am I Worth?

How Do Bioinformatics Programmer/Analyst II Salaries Vary from State to State?

Your salary can change significantly depending on where you work. States with a higher cost of living and strong industrial sectors often pay more to attract Bioinformatics Programmer/Analyst IIs. For example, consider the average annual salaries in these key locations:

  • District of Columbia: $108,500.
  • California: $108,100.
  • Massachusetts: $106,600.

Top Paying Cities for Bioinformatics Programmer/Analyst IIs

Salaries can also vary between different cities. Major metropolitan areas or cities with a high demand for technicians often offer more competitive pay. Here are a few examples of average annual salaries in different U.S. cities:

  • San Jose: $123,600
  • San Francisco: $122,300
  • Oakland: $119,600

What Skills Can Increase a Bioinformatics Programmer/Analyst II's Salary?

Demanded Skills for the Role:

  • Team Management (Mentioned in 3.17% Job Postings): The ability of an individual or an organization to administer and coordinate a group of individuals to perform a task. Team management involves teamwork, communication, objective setting and performance appraisals.
  • Clinical Research (Mentioned in 2.7% Job Postings): Clinical research is a branch of healthcare science that determines the safety and effectiveness (efficacy) of medications, devices, diagnostic products and treatment regimens intended for human use. These may be used for prevention, treatment, diagnosis or for relieving symptoms of a disease. Clinical research is different from clinical practice. In clinical practice established treatments are used, while in clinical research evidence is collected to establish a treatment.
  • SOP (Mentioned in 2.22% Job Postings): SOP is A standard operating procedure is a set of step-by-step instructions compiled by an organization to help workers carry out routine operations.
See More Skills
Skills Demand Percentage
Team Management 3.17%
Clinical Research 2.7%
SOP 2.22%
What skills can make your compensation higher?
Mastering certain specialized skills can lead to a significant increase in pay. Here are examples of skills and the potential impact they can have on a Bioinformatics Programmer/Analyst II's salary.
  • UAT: Can increase your salary by up to 21%.
  • SOP: Can increase your salary by up to 11%.
  • Clinical Trial: Can increase your salary by up to 10%.
Skill Salary Salary % Increase
UAT
$118,580
21%
SOP
$108,780
11%
Clinical Trial
$107,800
10%
Team Management
$106,820
9%
Innovation
$105,840
8%
Project Management
$105,840
8%
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How Education impacts a Bioinformatics Programmer/Analyst II's Salary?

Your level of education can impact your salary potential. While many Bioinformatics Programmer/Analyst IIs enter the field with a Associate's Degree degree, higher education can lead to more specialized and higher-paying roles.

According to our 100% employer-reported salary data, the median salary for a Bioinformatics Programmer/Analyst II with a Associate's Degree is between $83,884 and $88,906).

Bioinformatics Programmer/Analyst II Salaries by Degree Level

Typical Education for Bioinformatics Programmer/Analyst II
Degree Level % of user with this level of education
No Diploma 2.9%
High School 31.4%
Associates 2.9%
Bachelors 31.4%
Masters 60.0%
Doctorate 5.7%
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Bioinformatics Programmer/Analyst II Salary: Hourly Rate, Weekly Pay, and Monthly Pay

Understanding how a Bioinformatics Programmer/Analyst II's annual salary breaks down can help with budgeting. Below, you can see the average hourly rate, weekly pay, and monthly pay for this role. Use the buttons to switch between different pay periods.

Last Updated on March 01, 2026

Bioinformatics Programmer/Analyst II Salary Growth & Career Path

Promotions are the fastest way to increase your earnings. As a Bioinformatics Programmer/Analyst II, you have the following paths for advancement. The table below compares the salary raises for common next-step roles. By comparing these figures, you can choose the career path that best meets your financial goals.

Bioinformatics Programmer/Analyst II Salary Growth and Career Path
Next Step Role Estimate Salary Projected Raise
Cerner Certified Application Analyst Senior $120,600 23%
Bioinformatics Programmer/Analyst III $107,700 10%

Salary Trends for Bioinformatics Programmer/Analyst II

Salaries for a Bioinformatics Programmer/Analyst II can change over time, reflecting shifts in market demand and the overall economy. The median salary decreased from $86,047 in 2023 to around $85,658 in 2025, reflecting changes in demand, location, experience, and the wider economy. For a detailed analysis of Bioinformatics Programmer/Analyst II salary trends, .

Average Annual Salary of Bioinformatics Programmer/Analyst II Over Time

2022
$???
2023
$86,047
2024
$86,257
2025
$85,658
2026
$???
2027
$???
Year Average Annual Salary
2022
View More
2023 $86,047
2024 $86,257
2025 $85,658
2026
View More
2027
View More

Most common benefits for Bioinformatics Programmer/Analyst II

Social Security
401(k)
Disability
Healthcare
Pension
Time Off (days)
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Common company salaries for Bioinformatics Programmer/Analyst II

Here are companies hiring for Bioinformatics Programmer/Analyst II and their salaries, click below for more details.

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Ready to take the next step in your career? Browse thousands of current Bioinformatics Programmer/Analyst II job openings on our job board. Use the search bar below to find your perfect match.

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FAQ about Bioinformatics Programmer/Analyst II

1. Is bioinformatics stressful?

Bioinformatics can be a demanding field, often requiring attention to detail and problem-solving skills. The stress level may vary based on project deadlines and complexity. However, with a salary range of $80,100 to $101,000, many find the financial rewards worth the challenges, making it a fulfilling career for those passionate about the intersection of biology and technology.

2. What does a bioinformatics analyst do?

A bioinformatics analyst utilizes computational tools and techniques to analyze biological data, often focusing on genomic and proteomic information. They develop algorithms, manage databases, and interpret complex datasets to support research in areas like genetics and drug development. The salary for this role typically ranges from $80,100 to $101,000, with a median of $88,400.

3. Is bioinformatics in demand in USA?

Bioinformatics is indeed in demand in the USA. While the U.S. Bureau of Labor Statistics doesn't track bioinformatics separately, jobs in computer-based analysis are projected to grow by 22% by 2030, significantly above the national average. Salaries for Bioinformatics Programmers/Analysts range from $80,100 to $101,000, with a median of $88,400, reflecting the field's growing importance.

4. How much does a bioinformatics analyst make in the US?

The salary for a Bioinformatics Programmer/Analyst in the US ranges from $80,100 to $101,000, with a mid-salary of $88,400. These figures reflect the typical earnings in the field, providing a clear picture of the compensation landscape for this role.

5. What is the highest paying bioinformatics company?

The salary range for Bioinformatics Programmers/Analysts typically falls between $80,100 and $101,000, with a mid-salary of $88,400. While some top-paying companies like IDbyDNA and Gritstone Bio offer salaries significantly higher, the average compensation in the field remains within this range, reflecting the demand for skilled professionals in bioinformatics.

6. How much does Pfizer bioinformatics pay?

Pfizer offers competitive salaries for Bioinformatics Programmers/Analysts, with a minimum salary of $80,100, a mid-range salary of $88,400, and a maximum salary of $101,000 per year. Additional compensation may vary based on performance and other factors.

Where Does Our Salary Data Come From?

Salary.com provides salary estimates, histograms, trends, and comparisons using data from employer job postings and third-party sources.

We offer detailed salary information across multiple percentiles for your reference. (Click here to learn Why the Salary Midpoint Formula Is Crucial for Achieving Pay Equity.)

With the most extensive online, real-time compensation data available, Salary.com helps you pinpoint your exact pay target.

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