EHR Certified Application Analyst III Salary in the United States

How much does an EHR Certified Application Analyst III make in the United States?

As of August 01, 2026, the average salary for an EHR Certified Application Analyst III in the United States is $120,550 per year, which breaks down to an hourly rate of $58.

However, an EHR Certified Application Analyst III's salary can vary significantly. Here’s a look at the typical salary range:

  • Top Earners (90th percentile): $132,565
  • Majority Range (25th-75th percentile): $115,202 to $126,839
  • Entry-Level (10th percentile): $110,333

Key Factors That Influence EHR Certified Application Analyst III Salaries

An EHR Certified Application Analyst III's salary isn't a fixed number. It's shaped by several important factors. Below, we'll explore how your years of experience, geographic location and company size can directly affect your earning potential.

How Experience Level Affects EHR Certified Application Analyst III Salaries?

Experience is a primary driver of an EHR Certified Application Analyst III's salary. As you build your skills and take on more complex tasks, your compensation generally increases. Here's how the average salary grows at different career stages:

  • EHR Certified Application Analyst I (0-2 years): $84,172
  • EHR Certified Application Analyst II (2-4 years): $99,468
  • EHR Certified Application Analyst III (4-7 years): $120,550
Job Role Years of Experience Average Salary
EHR Certified Application Analyst I0-2 years$84,172
EHR Certified Application Analyst II2-4 years$99,468
EHR Certified Application Analyst III4-7 years$120,550

Top Paying Cities for EHR Certified Application Analyst III

Salaries can also vary between different cities. Major metropolitan areas or cities with a high demand for technicians often offer more competitive pay. Here are a few examples of average annual salaries in different U.S. cities:

  • San Jose: $152,050
  • San Francisco: $150,385
  • Oakland: $147,216

What Skills Can Increase an EHR Certified Application Analyst III's Salary?

Demanded Skills for the Role:

  • Analysis (Mentioned in 10.57% Job Postings): Analysis is the process of considering something carefully or using statistical methods in order to understand it or explain it.
  • Installation (Mentioned in 1.89% Job Postings): The action or process of installing someone or something, or of being installed. the act of installing the state of being installed, something that is installed for use.
  • Test Plans (Mentioned in 1.45% Job Postings): A test plan is a document detailing the objectives, resources, and processes for a specific test for a software or hardware product. The plan typically contains a detailed understanding of the eventual workflow.
Skills Demand Percentage
Analysis 10.57%
Installation 1.89%
Test Plans 1.45%

What skills can make your compensation higher?

Mastering certain specialized skills can lead to a significant increase in pay. Here are examples of skills and the potential impact they can have on an EHR Certified Application Analyst III's salary.

  • Taking Ownership: Can increase your salary by up to 13%.
  • System Testing: Can increase your salary by up to 13%.
  • Enterprise Applications: Can increase your salary by up to 9%.
Skill Salary Salary % Increase
Taking Ownership $136,222
13%
System Testing $136,222
13%
Enterprise Applications $131,400
9%

EHR Certified Application Analyst III Salary by Company Size: Startups vs. Enterprise

EHR Certified Application Analyst III salary potential scales significantly with company size. Data shows that Enterprise companies (5,000+ employees) pay the highest average salary at around $128,536. While startup companies pay approximate $109,351.

EHR Certified Application Analyst III Salary by Company Size

Company Size Employees Average Salary
Startup 1~50 $109,351
Growth Stage 51~500 $115,491
Established 501~5000 $124,283
Enterprise 5000+ $128,536

EHR Certified Application Analyst III Salary by Industry: Top Paying Sectors

For EHR Certified Application Analyst III roles, the industry you choose can impact your earning potential by as much as 50% (the gap between the highest and lowest paying industries). Data shows that the highest-paying industry, Edu., Gov't. & Nonprofit, offers compensation 20% above the average. Conversely, EHR Certified Application Analyst positions in Business Services typically offer lower base pay, as this sector often view EHR Certified Application Analyst III as a support function rather than a direct revenue driver.

The top paying industries for an EHR Certified Application Analyst III

Industry Sector Average Annual Salary Average Hourly Rate Pay vs.Avg
Edu., Gov't. & Nonprofit$144,660$70.020%
Healthcare$132,605$64.010%

EHR Certified Application Analyst III Salary: Hourly Rate, Weekly Pay, and Monthly Pay

Understanding how an EHR Certified Application Analyst III's annual salary breaks down can help with budgeting. Below, you can see the average hourly rate, weekly pay, and monthly pay for this role. Use the buttons to switch between different pay periods.

Last Updated on August 01, 2026
$115,202
Average $120,550/year
$126,839
$9,600
Average $10,046/month
$10,570
$2,215
Average $2,318/week
$2,439
$55
Average $58/hour
$61
Annual Salary Monthly Pay Weekly Pay Hourly Wage
75th Percentile $126,839 $10,570 $2,439 $61
Average $120,550 $10,046 $2,318 $58
25th Percentile $115,202 $9,600 $2,215 $55

EHR Certified Application Analyst III Salary Growth & Career Path

For an EHR Certified Application Analyst III, the most direct path to higher earnings is advancing to the Clinical Programmer IV role. This promotion typically comes with a significant pay increase, bringing the average annual salary to $134,792 - a projected growth of 12% over your current level.

Most common benefits for EHR Certified Application Analyst III

  • Social Security
  • 401 (k)
  • Disability
  • Healthcare
  • Pension
  • Time Off (days)

Common company salaries for EHR Certified Application Analyst III

Here are companies hiring for EHR Certified Application Analyst III and their salaries, click below for more details.

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FAQ about EHR Certified Application Analyst III

1. Where can an EHR Certified Application Analyst III earn the most?

An EHR Certified Application Analyst III's earning potential can vary widely depending on several factors, including location, industry, experience, education, and the specific employer. According to the latest salary data by Salary.com, an EHR Certified Application Analyst III earns the most in San Jose, CA, where the annual salary of an EHR Certified Application Analyst III is $152,050.

2. What is the highest pay for EHR Certified Application Analyst III?

The highest pay for EHR Certified Application Analyst III is $132,565.

3. What is the lowest pay for EHR Certified Application Analyst III?

The lowest pay for EHR Certified Application Analyst III is $110,333.

4. What are the responsibilities of EHR Certified Application Analyst III?

Plans, analyzes, designs and modifies EHR (electronic health record) software applications, including encoding, testing, debugging and installing to support the implementation of one or more software modules. Consults with users to identify current operating procedures and to clarify program objectives. May be expected to write documentation describing program development, logic, coding, and corrections. Typically requires a bachelor's degree. Requires certification in one or more dedicated modules, such as Scheduling, Emergency Room, Patient Registration, or other medical specialty. Typically reports to a manager. Work is generally independent and collaborative in nature. Contributes to moderately complex aspects of a project. Typically requires 4-7 years of related experience.

5. What industry pays the highest salary for EHR Certified Application Analyst III?

The Edu., Gov't. & Nonprofit industry offers the highest average compensation for EHR Certified Application Analyst III roles, with salaries approximately 20% above the market median.

Where Does Our Salary Data Come From?

Salary.com provides salary estimates, histograms, trends, and comparisons using data from employer job postings and third-party sources.

We offer detailed salary information across multiple percentiles for your reference. (Click here to learn Why the Salary Midpoint Formula Is Crucial for Achieving Pay Equity.)

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