As of May 01, 2026, the average annual salary for assistant pharmacist in San Diego, CA is $34,243, equivalent to $16 per hour, $659 weekly, or $2,854 monthly. These figures, sourced from Salary.com’s real-time job posting scans, highlight competitive earning potential for assistant pharmacist in cities like San Jose, Santa Clara, and San Francisco.

Annually Salaries for assistant pharmacist in San Diego, CA vary widely, spanning from $29,279 to $42,979. Most professionals fall between the 25th percentile ($31,645) and 75th percentile ($38,816), while top earners (90th percentile) make $42,979 per year. This $7,171 pay gap underscores opportunities for salary growth through certifications, specialized skills like Customer Service or CVS, or targeting high-paying regions like District of Columbia or California.

Location and experience significantly influence earnings. For example, San Diego assistant pharmacist often earn 2.2% higher than national averages. However, San Diego currently ranks 128 statewide for assistant pharmacist job salary. Professionals are advised to focus on high-growth sectors like to offset market challenges.

Based on HR-reported data: a national average with a geographic differential
assistant pharmacist Salaries by Percentile
Percentile Salary Location Last Updated
10th Percentile assistant pharmacist Salary $29,279 San Diego, CA May 01, 2026
25th Percentile assistant pharmacist Salary $31,645 San Diego, CA May 01, 2026
50th Percentile assistant pharmacist Salary $34,243 San Diego, CA May 01, 2026
75th Percentile assistant pharmacist Salary $38,816 San Diego, CA May 01, 2026
90th Percentile assistant pharmacist Salary $42,979 San Diego, CA May 01, 2026
25% $31,645 10% $29,279 90% $42,979 75% $38,816 $34,243 50%(Median) Didn’t find job title? Click
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Check out assistant pharmacist jobs in San Diego, California

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What is a assistant pharmacist ?

The salary of an assistant pharmacist typically varies based on factors such as location, experience, and the type of healthcare facility. On average, assistant pharmacists can expect to earn between $30,000 and $50,000 annually. Entry-level positions may start at the lower end of this range, while those with more experience or specialized skills may command higher salaries. Benefits such as health insurance, retirement plans, and paid time off are often included, enhancing overall compensation. Additionally, opportunities for advancement within the pharmacy field can lead to increased earning...

Source: (as of 06/04/2025). Read more from

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Job Openings for assistant pharmacist in San Diego, CA

Understand the total compensation opportunity for a assistant pharmacist, base salary plus other pay elements

Average Base Salary

Core compensation

 
 
 
31645
38816
34243

Average Total Cash Compensation

Includes base and annual incentives

 
 
 
31036
39668
34327
These charts show the average base salary (core compensation), as well as the average total cash compensation for the job of assistant pharmacist in San Diego, CA. The base salary for assistant pharmacist ranges from $31,645 to $38,816 with the average base salary of $34,243. The total cash compensation, which includes base, and annual incentives, can vary anywhere from $31,036 to $39,668 with the average total cash compensation of $34,327.

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31645
38816

 

About San Diego, California    According to SDSU professor emeritus Monte Marshall, San Diego Bay is "the surface expression of a north-south-trending, nested graben". The Rose Cany....More

San Diego, California  area prices were up 2.6% from a year ago

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