As of April 01, 2026, the average annual salary for Program Management Analyst in San Diego, CA is $64,616, equivalent to $31 per hour, $1,243 weekly, or $5,385 monthly. These figures, sourced from Salary.com’s real-time job posting scans, highlight competitive earning potential for Program Management Analyst in cities like Santa Clara, San Jose, and Fremont.

Annually Salaries for Program Management Analyst in San Diego, CA vary widely, spanning from $53,684 to $76,277. Most professionals fall between the 25th percentile ($58,894) and 75th percentile ($70,720), while top earners (90th percentile) make $76,277 per year. This $11,826 pay gap underscores opportunities for salary growth through certifications, specialized skills like Leadership or Student Engagement, or targeting high-paying regions like District of Columbia or California.

Location and experience significantly influence earnings. For example, San Diego Program Management Analyst often earn 1.9% higher than national averages. However, San Diego currently ranks 135 statewide for Program Management Analyst job salary. Professionals are advised to focus on high-growth sectors like to offset market challenges.

Based on HR-reported data: a national average with a geographic differential
Program Management Analyst Salaries by Percentile
Percentile Salary Location Last Updated
10th Percentile Program Management Analyst Salary $53,684 San Diego, CA April 01, 2026
25th Percentile Program Management Analyst Salary $58,894 San Diego, CA April 01, 2026
50th Percentile Program Management Analyst Salary $64,616 San Diego, CA April 01, 2026
75th Percentile Program Management Analyst Salary $70,720 San Diego, CA April 01, 2026
90th Percentile Program Management Analyst Salary $76,277 San Diego, CA April 01, 2026
25% $58,894 10% $53,684 90% $76,277 75% $70,720 $64,616 50%(Median) Didn’t find job title? Click
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Program Management Analyst

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Job Openings for Program Management Analyst in San Diego, CA

Career Path for this job

  1. This Job:

    Program Management Analyst

    0 - 2 years experience
    Bachelor's Degree

  2. Up a level:

    Program Management Office Analyst II

    2 - 4 years experience
    Bachelor's Degree

Understand the total compensation opportunity for a Program Management Analyst, base salary plus other pay elements

Average Base Salary

Core compensation

 
 
 
58894
70720
64616

Average Total Cash Compensation

Includes base and annual incentives

 
 
 
62258
79822
69685
These charts show the average base salary (core compensation), as well as the average total cash compensation for the job of Program Management Analyst in San Diego, CA. The base salary for Program Management Analyst ranges from $58,894 to $70,720 with the average base salary of $64,616. The total cash compensation, which includes base, and annual incentives, can vary anywhere from $62,258 to $79,822 with the average total cash compensation of $69,685.

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58894
70720

 

About San Diego, California    According to SDSU professor emeritus Monte Marshall, San Diego Bay is "the surface expression of a north-south-trending, nested graben". The Rose Cany....More

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