As of July 01, 2026, the average annual salary for Senior Program Analyst in Flagstaff, AZ is $133,360, equivalent to $64 per hour, $2,565 weekly, or $11,113 monthly. These figures, sourced from Salary.com’s real-time job posting scans, highlight competitive earning potential for Senior Program Analyst in cities like San Jose, Santa Clara, and San Francisco.

Annually Salaries for Senior Program Analyst in Flagstaff, AZ vary widely, spanning from $113,651 to $154,348. Most professionals fall between the 25th percentile ($123,043) and 75th percentile ($144,346), while top earners (90th percentile) make $154,348 per year. This $21,303 pay gap underscores opportunities for salary growth through certifications, specialized skills like Analysis or Application Development, or targeting high-paying regions like District of Columbia or California.

Location and experience significantly influence earnings. For example, Flagstaff Senior Program Analyst often earn 1.3% lower than national averages. However, Flagstaff currently ranks 504 statewide for Senior Program Analyst job salary. Professionals are advised to focus on high-growth sectors like to offset market challenges.

Based on HR-reported data: a national average with a geographic differential
Senior Program Analyst Salaries by Percentile
Percentile Salary Location Last Updated
10th Percentile Senior Program Analyst Salary $113,651 Flagstaff, AZ July 01, 2026
25th Percentile Senior Program Analyst Salary $123,043 Flagstaff, AZ July 01, 2026
50th Percentile Senior Program Analyst Salary $133,360 Flagstaff, AZ July 01, 2026
75th Percentile Senior Program Analyst Salary $144,346 Flagstaff, AZ July 01, 2026
90th Percentile Senior Program Analyst Salary $154,348 Flagstaff, AZ July 01, 2026
25% $123,043 10% $113,651 90% $154,348 75% $144,346 $133,360 50%(Median) Didn’t find job title? Click
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Senior Program Analyst

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Average Base Salary

Core compensation

 
 
 
123043
144346
133360

Average Total Cash Compensation

Includes base and annual incentives

 
 
 
126597
161183
143005
These charts show the average base salary (core compensation), as well as the average total cash compensation for the job of Senior Program Analyst in Flagstaff, AZ. The base salary for Senior Program Analyst ranges from $123,043 to $144,346 with the average base salary of $133,360. The total cash compensation, which includes base, and annual incentives, can vary anywhere from $126,597 to $161,183 with the average total cash compensation of $143,005.

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123043
144346

 

About Flagstaff, Arizona    Flagstaff is a city in and the county seat of Coconino County in northern Arizona, in the southwestern United States. In 2015, the city's estimated po....More

Flagstaff, Arizona  area prices were up 2.5% from a year ago

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