As of February 01, 2026, the average annual salary for Senior Program Analyst in La Crosse, WI is $130,437, equivalent to $63 per hour, $2,508 weekly, or $10,870 monthly. These figures, sourced from Salary.com’s real-time job posting scans, highlight competitive earning potential for Senior Program Analyst in cities like Santa Clara, San Jose, and Fremont.

Annually Salaries for Senior Program Analyst in La Crosse, WI vary widely, spanning from $111,231 to $151,015. Most professionals fall between the 25th percentile ($120,384) and 75th percentile ($141,208), while top earners (90th percentile) make $151,015 per year. This $20,824 pay gap underscores opportunities for salary growth through certifications, specialized skills like Analysis or Application Development, or targeting high-paying regions like District of Columbia or California.

Location and experience significantly influence earnings. For example, La Crosse Senior Program Analyst often earn 4.4% lower than national averages. However, La Crosse currently ranks 594 statewide for Senior Program Analyst job salary. Professionals are advised to focus on high-growth sectors like to offset market challenges.

Based on HR-reported data: a national average with a geographic differential
Senior Program Analyst Salaries by Percentile
Percentile Salary Location Last Updated
10th Percentile Senior Program Analyst Salary $111,231 La Crosse, WI February 01, 2026
25th Percentile Senior Program Analyst Salary $120,384 La Crosse, WI February 01, 2026
50th Percentile Senior Program Analyst Salary $130,437 La Crosse, WI February 01, 2026
75th Percentile Senior Program Analyst Salary $141,208 La Crosse, WI February 01, 2026
90th Percentile Senior Program Analyst Salary $151,015 La Crosse, WI February 01, 2026
25% $120,384 10% $111,231 90% $151,015 75% $141,208 $130,437 50%(Median) Didn’t find job title? Click
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Check out Senior Program Analyst jobs in La Crosse, Wisconsin

Senior Program Financial Analyst

Leonardo DRS - Menomonee Falls, WI

Senior Program Data Analyst

Children's Wisconsin - Milwaukee, WI

Senior Program Analyst — Data & Informatics

Baylor College of Medicine - Granite Heights, WI

Program Analyst

Carlson Wagonlit Travel (Hauptsitz Deutschland) / CWT Beheermaatschappij B.V. Deutschland - Granite Heights, WI

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Senior Program Analyst

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Job Openings for Senior Program Analyst in La Crosse, WI

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Average Base Salary

Core compensation

 
 
 
120384
141208
130437

Average Total Cash Compensation

Includes base and annual incentives

 
 
 
122269
155675
138118
These charts show the average base salary (core compensation), as well as the average total cash compensation for the job of Senior Program Analyst in La Crosse, WI. The base salary for Senior Program Analyst ranges from $120,384 to $141,208 with the average base salary of $130,437. The total cash compensation, which includes base, and annual incentives, can vary anywhere from $122,269 to $155,675 with the average total cash compensation of $138,118.

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120384
141208

 

About La Crosse, Wisconsin    La Crosse is located on the western border of the midsection of Wisconsin, on a broad alluvial plain along the east side of the Mississippi River. The....More

La Crosse, Wisconsin  area prices were up 1.3% from a year ago

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