As of July 01, 2026, the average annual salary for Clinical Application Analyst in the US is $95,340, equivalent to $46 per hour, $1,833 weekly, or $7,945 monthly. These figures, sourced from Salary.com’s real-time job posting scans, highlight competitive earning potential for Clinical Application Analyst in cities like San Jose, Santa Clara, and San Francisco.

Annually Salaries for Clinical Application Analyst in the US vary widely, spanning from $77,896 to $108,070. Most professionals fall between the 25th percentile ($86,209) and 75th percentile ($102,004), while top earners (90th percentile) make $108,070 per year. This $15,795 pay gap underscores opportunities for salary growth through certifications, specialized skills like Analysis or Process Analysis, or targeting high-paying regions like District of Columbia or California.

Location and experience significantly influence earnings. For example, District of Columbia Clinical Application Analyst often earn 10.7% above national averages due to demand from Fortune 59 companies and industry startups. Professionals are advised to focus on high-growth sectors like Business Services to offset market challenges.

Based on HR-reported data: a national average with a geographic differential
Clinical Application Analyst Salaries by Percentile
Percentile Salary Location Last Updated
10th Percentile Clinical Application Analyst Salary $77,896 US July 01, 2026
25th Percentile Clinical Application Analyst Salary $86,209 US July 01, 2026
50th Percentile Clinical Application Analyst Salary $95,340 US July 01, 2026
75th Percentile Clinical Application Analyst Salary $102,004 US July 01, 2026
90th Percentile Clinical Application Analyst Salary $108,070 US July 01, 2026
25% $86,209 10% $77,896 90% $108,070 75% $102,004 $95,340 50%(Median) Didn’t find job title? Click
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Check out Clinical Application Analyst jobs in Columbus, Ohio

Epic Application Analyst

Ensemble Health Partners - Kettering, OH

Epic Application Analyst

Ensemble Health Partners - Chesapeake, OH

Epic Application Analyst

Ensemble Health Partners - Munson, OH

Epic Application Analyst

Ensemble Health Partners - Hyde Park, OH

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Clinical Application Analyst

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Average Base Salary

Core compensation

 
 
 
86209
102004
95340

Average Total Cash Compensation

Includes base and annual incentives

 
 
 
87411
108288
97135
These charts show the average base salary (core compensation), as well as the average total cash compensation for the job of Clinical Application Analyst in the United States. The base salary for Clinical Application Analyst ranges from $86,209 to $102,004 with the average base salary of $95,340. The total cash compensation, which includes base, and annual incentives, can vary anywhere from $87,411 to $108,288 with the average total cash compensation of $97,135.

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86209
102004

 

Skills associated with Clinical Application Analyst: #develop

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